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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924836.1_cds_XP_016473152.1_65312
CDS Infomation

[gene=LOC107795088] [db_xref=GeneID:107795088] [protein=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform X2] [protein_id=XP_016473152.1] [location=join(6354..6597,7774..7863,7960..8093,8239..8409,8785..8901,8988..9067,9993..10188,11016..11130,11816..11990,12705..12861,13449..13515,13596..13798)] [gbkey=CDS]
Sequence

ATGGCGATTGTGGCGGAAGGTGGTAAGGAGTTGGAGACGTGCGTGGTATTAGGGGGACGA
GGATTCGTCGGGAAATGGCTTGTGGATAGGCTTCTTCGAATCGGCAATTGGATCGTCCGA
ATCGCCGATTCTTTGCCCAGTCTTCAACTTGAACCCTCCGAGTCCCTTCTTTCTCATGCC
CTCTCTTCTGGCCGCGCTTCCTATTTCCATGTCGATATTCTTCATAAATCTCATATTATT
CCAGCTATTGATGGCGCATCAGTTGTATTTTACATGGATTCTAGGGATTCATATGCTCAT
GATTTCTATATTTGCTACACAATTGTTGTTCAAGGTGCCAAGAATATCATTACTGCTTGT
CAAGAGTGTAAAGTCAAAAGGCTAGTATACAACAGTTCTGCTGAGGTAGTTTTGAACAGC
TGGCAGGATATACATGGCGGGGATGAGTCCTTACCATATTCCAGTAAATTTGTGAACATG
GTAACTGATCTCAAGGCTCAAGCAGAGGCTCTAGTTTTAGTTGCAAATGATGCTGACGGC
CTTCTTACTTGTGCAATTCGTCCTAGCTATGTTTTTGGACCTGAAGACAATTATCTCTCC
TCTTTGCTGGTCAATGTTGCAAAATCTGGCTGGGCCAAGTTTATTATAGGGCTTGGTGAC
AATACGTCTGATTTCACCTATGTGGAGAATGTTGCCCATGCACATATATGTGCTGAAAAA
GCTCTACGTTCTAGGGGAAGTAACATATGTGGCAAGGCCTTTTTCATCACTAATCTCAAG
CCAATGAAATTCAAGGATTTTGTATCTCTTGTGATGGAGAGATTGGGATATCAAAGGTCC
ATGATCAAGATTCCTGCTAGGGTTGTCCAATATTGTACTTTGATCATGAAATGGACAATT
TCAAGGATGAGCAATTGGAATCCTGATAATGTGCCAGCTTTTGATATTATTGAATTAGCA
TTGTGCCATAGGAGATTTAATTGCTTTGCAGCTCAGAAATATATTGGATATTCTCCTGTT
GTTTCCCTTGAAGAAGGAGTTGCTTTAACCACTAAGTCCTTTCATTCAGCCAGGGAATCA
TCTTTGTCAAGCGATAGTGACACTGATGAGGAATCAAACGTGCATAAACTGCTAGGAGGT
GGAAAAGCTGCCGAAATTTTATTGTGGAGAGATGAGCAGAGAACATTTACTTGTTTCCTT
TTGCTGGTTTTCATCCATTACTGGTTCTTCCTGTCTGGGAGGAGTTTTCTTTCATCTCTT
GCCCAGCTTCTACTGATGATCGCTTCTGCTCTCTGGGGATACAGCATTCTGCCACCAACA
ATATATGGCATTGCAGTTCCCAGGATATCGTGGTCTTTCTTTGAGATCTCTGAAGTGGAT
ATGAGAAATTGCTTTTACAACTTAGCATATACGTGGAACAGAATGAGTCATTTAGCAAGT
TTACTAGCCCAAGGAGAAGACTGGTCTATATTTTTGAAGGCCGCCATACCCCTGTATTGT
TTGAAGTTGATAATTGCAGATTGCTTGACTTTTGCACTTGGTATAGCACTAGCTCTGGCA
TTCACTTCATTCCTCATTTACGAGCAGTACGAGGATGAAATTGATAGTACGGCAAATGTA
ATATTCAGCATATCAAAAGGTGCCTTTACTTTGCTGATGAGGAGCTTACGCTTGCCTTTG
GCATTGATCCATTCTGATTCAGAAATGCCTCGAGGGATCTGCTCTTCTAGATTGAAGATT
CAGCAATGA

Peptide Sequence

PEP ID

XP_016473152.1
PEP Infomation

PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform X2 [Nicotiana tabacum]
Sequence

MAIVAEGGKELETCVVLGGRGFVGKWLVDRLLRIGNWIVRIADSLPSLQLEPSESLLSHA
LSSGRASYFHVDILHKSHIIPAIDGASVVFYMDSRDSYAHDFYICYTIVVQGAKNIITAC
QECKVKRLVYNSSAEVVLNSWQDIHGGDESLPYSSKFVNMVTDLKAQAEALVLVANDADG
LLTCAIRPSYVFGPEDNYLSSLLVNVAKSGWAKFIIGLGDNTSDFTYVENVAHAHICAEK
ALRSRGSNICGKAFFITNLKPMKFKDFVSLVMERLGYQRSMIKIPARVVQYCTLIMKWTI
SRMSNWNPDNVPAFDIIELALCHRRFNCFAAQKYIGYSPVVSLEEGVALTTKSFHSARES
SLSSDSDTDEESNVHKLLGGGKAAEILLWRDEQRTFTCFLLLVFIHYWFFLSGRSFLSSL
AQLLLMIASALWGYSILPPTIYGIAVPRISWSFFEISEVDMRNCFYNLAYTWNRMSHLAS
LLAQGEDWSIFLKAAIPLYCLKLIIADCLTFALGIALALAFTSFLIYEQYEDEIDSTANV
IFSISKGAFTLLMRSLRLPLALIHSDSEMPRGICSSRLKIQQ

Transcript Sequence

Gene sequence data has not been registered.